Task: Imaging Development
Description: Debian Med packages for medical image development
 This metapackage will install Debian packages which might be useful
 for developing applications for medical image processing.

Depends: ctn-dev, cimg-dev, libminc-dev, libmdc2-dev, libvtk5-dev

Depends: libnifti-dev

Depends: libigstk4-dev

Suggests: igstk-examples

Depends: libinsighttoolkit3-dev

Suggests: insighttoolkit3-examples

Suggests: libnifti-doc

Suggests: libvtk5.4

Depends: libvolpack1-dev

Depends: libgdcm2-dev
Depends: python-gdcm

Suggests: python-libavg
Homepage: http://www.libavg.de
License: LGPL
Vcs-Svn: svn://svn.debian.org/collab-maint/deb-maint/libavg/trunk/
Vcs-Browser: http://svn.debian.org/wsvn/collab-maint/deb-maint/libavg/trunk/
Pkg-URL: http://snapshot.debian.org/archive/debian/20100503T045439Z/pool/main/liba/libavg/python-libavg_1.0.1-1_amd64.deb
Pkg-Description: Description: libavg Ain't Vector Graphics
 libavg is a high-level multimedia platform with a focus on interactive
 installations. It is meant to pick up where Macromedia Director leaves off and
 gives you high-quality hardware-accelerated visuals as well as easy and
 flexible authoring, testing and deployment. libavg integrates well with other
 open-source solutions for sound, networking and hardware device support,
 resulting in a complete and well-integrated package. It uses an xml-based
 layout language for screen design and Python as scripting language.
Remark: Homepage shows some potential medical applications
 The package was once part of Debian but is orphaned now.  Feel free to pick the
 latest snapshot from http://snapshot.debian.org/package/libavg/1.0.1-1/ or use
 the packaging in collab-maint for reintroducing.

Depends: python-mvpa
Why: Suggested by maintainer Michael Hanke <michael.hanke@gmail.com>

Depends: python-nipy

 ; Added by blends-inject 0.0.4. [Please note here if modified manually]
Depends: python-nipype
Published-Authors: SS Ghosh, C Burns, D Clark, K Gorgolewski, YO Halchenko, C Madison, R Tungaraza, KJ Millman
Published-In: 16th Annual Meeting of the Organization for Human Brain Mapping
Published-Title: Nipype: Opensource platform for unified and replicable interaction  with existing neuroimaging tools
Published-URL: https://github.com/satra/ohbm2010/raw/master/NIPYPE/POSTER/poster_nipype.pdf
Published-Year: 2010

Depends: python-nitime

Depends: python-casmoothing

Depends: libvia-dev

Depends: odin

Depends: libcv-dev

Depends: libvxl1-dev

Depends: libteem1-dev

Depends: gmic

Depends: libgiftiio-dev

Depends: libactiviz.net-cil

Depends: libvista2-dev
Homepage: http://mia.sourceforge.net/
License: GPL
Pkg-Description: software environment for computer vision research
 Vista is a software environment for computer vision research. It is
 designed to support not only images, but also edge sets, camera models,
 and more complex  data structures. Vista includes libraries of common
 computer vision and image  processing algorithms. It is written in
 ANSI C, for UNIX platforms running X Windows, and it is freely available.
 The original development was done  at University of British Columbia
 (http://www.cs.ubc.ca/nest/lci/vista/vista.html).
 .
 Because the development was stalled by the original authors the
 development continued in the "Tools for Medical Image Analysis"
 framework (http://mia.sourceforge.net/) which is maintained by
 Max Planck Institute of Cognitive Neuroscience
 (http://www.cns.mpg.de/).
 .
 This is the development package.
Remark: With libvia-dev an alternative is already part of Debian.

Depends: libmni-perllib-perl
Homepage: http://packages.bic.mni.mcgill.ca/tgz/
License: Artistic License
Responsible: NeuroDebian Team <team@neuro.debian.net>
Pkg-URL: http://apsy.gse.uni-magdeburg.de/svn/fsl/libmni-perllib-perl/trunk/debian/
Pkg-Description: The MNI Perl Library
 Collection of various Perl module used by other MNI software
 packages.
Remark: There was some previous work on this software which is stalled currently
 Michael Hanke agreed to take over his stuff from mentors 
 http://mentors.debian.net/cgi-bin/sponsor-pkglist?action=details;package=libmni-perllib-perl
 to Debian Med svn and start group maintenance. 

Depends: libgiftiio-dev
License: Public domain
Pkg-URL: http://neuro.debian.net/pkgs/libgifti-dev.html

Depends: python-dicom
License: MIT
Pkg-URL: http://neuro.debian.net/pkgs/python-dicom.html

Depends: libopenmeeg-dev
Published-Authors: Alexandre Gramfort, Théodore Papadopoulo, Emmanuel Olivi, Maureen Clerc
Published-In: BioMedical Engineering OnLine 45:9
Published-Title: OpenMEEG: opensource software for quasistatic bioelectromagnetics
Published-URL: http://www.biomedical-engineering-online.com/content/9/1/45
Published-Year: 2010

Depends: python-nibabel

 ; Added by blends-inject 0.0.2. [now official package]
Depends: libgdf-dev

 ; Added by blends-inject 0.0.6. [Please note here if modified manually]
Suggests: emokit
Homepage: https://github.com/daeken/Emokit
Language: Python, C
License: BSD-3
Vcs-Browser: https://github.com/daeken/Emokit
Vcs-Git: git://github.com/daeken/Emokit.git
Pkg-Description: Emotiv EPOC headset Python interface
 Emotive is an interface to a budget Emotiv EPOC EEG headset.

 ; Added by blends-inject 0.0.7. [s/pyxnat/python-pyxnat/]
Depends: python-pyxnat

Depends: python-dipy
Published-Authors: Garyfallidis E, Brett M, Tsiaras V, Vogiatzis G, Nimmo-Smith I
Published-In: Proc. Intl. Soc. Mag. Reson. Med. 18
Published-Title: Identification of corresponding tracks in diffusion MRI tractographies
Published-Year: 2010

 ; Added by blends-inject 0.0.7. [Removed unneeded publication dat]
Depends: libbiosig-dev

Depends: libctk-dev

 ; Added by blends-inject 0.0.7. [now official package]
Depends: python-cfflib

Depends: libopenslide-dev

Depends: python-openslide

Depends: libopenslide-java

Depends: libbio-formats-java
Language: Java
Remark: This library would enhance the package imagej

Suggests: libeegdev-dev

Suggests: libxdffileio-dev

Depends: octave-dicom
Homepage: http://octave.sourceforge.net/dicom/
License: GPL-v3+
Pkg-Description: Dicom support in Octave
 Digital communications in medicine (DICOM) file io. Depends on Grassroots DICOM (GDCM)

Depends: libcamitk3-dev
