This work was packaged for Debian by:

    Richard Holland <holland@eaglegenomics.com> on Fri, 20 Aug 2010 14:46:17 +0200

It was downloaded from:

    cvs://cvs.sanger.ac.uk

and the user database schema came from:

    ftp://ftp.ensembl.org/pub/release-62/mysql/ensembl_web_user_db/ensembl_web_user_db.sql.gz


Files: ensembl-compara/modules/Algorithm/Diff.pm
       ensembl-external/family/modules/Algorithm/Diff.p
Upstream Authors:
	Anton Enright <enright@ebi.ac.uk>
	Ned Konz <perl@bike-nomad.com>
	Mark-Jason Dominus <mjd-perl-diff@plover.com>
	Mario I. Wolczko <mario@wolczko.com>

Files: ensembl/modules/Bio/EnsEMBL/Utils/Cache.pm
Author: Joshua Chamas <chamas@alumni.stanford.org>
Copyright: (c) 1999-2002 Joshua Chamas, Chamas Enterprises Inc.  
	   Sponsored by development on NodeWorks http://www.nodeworks.com

	All rights reserved. This program is free software; 
	you can redistribute it and/or modify it under the same 
	terms as Perl itself. 
License:  Artistic or GPL-1+


Files: modules/Bio/Das/*
Author: Roger Pettett <rpettett@cpan.org> <rmp@sanger.ac.uk>
Copyright: (C) 2007 GRL, by Roger Pettett
License:  Artistic or GPL-1+

Files: modules/CSS/Minifier.pm
Author: Peter Michaux <petermichaux@gmail.com>
Copyright: (C) 2007 by Peter Michaux
License:  Artistic or GPL-1+

Files: modules/JavaScript/Minifier.pm
Authors: Peter Michaux <petermichaux@gmail.com>
         Eric Herrera <herrera@10east.com>
Copyright: (C) 2007 by Peter Michaux
License:  Artistic or GPL-1+

Files: htdocs/jalview/jalview*.jar
Authors: Andrew Waterhouse,
         Jim Procter <jprocter@compbio.dundee.ac.uk>,
         David Martin,
         Michele Clamp,
         James Cuff,
         Stephen Searle,
         Geoff Barton
Homepage: http://www.jalview.org
Copyright: (C) 1999-2011 by all authors.
License:  GPL-3

Files: *

Upstream Authors:

    Ewan Birney <birney@ebi.ac.uk>
    and many others in the Ensembl Web Team.  Amongst them

    Patrick Meidl <pm2@sanger.ac.uk>, <meidl@ebi.ac.uk>
    Jim Stalker <jws@sanger.ac.uk>
    Javier Herrero <jherrero@ebi.ac.uk>
    Kathryn Beal <kbeal@ebi.ac.uk>
    Stephen Fitzgerald <stephenf@ebi.ac.uk>
    Albert Vilella <avilella@ebi.ac.uk>
    Abel Ureta-Vidal <abel@ebi.ac.uk>
    Cara Woodwark <cara@ebi.ac.uk>
    Heikki Levaslo <heikki@ebi.ac.uk>
    Andy Jenkinson <aj@ebi.ac.uk>
    Arek Kasprzyk <arek@ebi.ac.uk>
    Jody Clements <jc3@sanger.ac.uk>
    Tony Cox <avc@sanger.ac.uk>
    Pedro M. Gomez-Fabre <pedro.fabre-at-gen.gu.se>
    Steve Searle <searle@sanger.ac.uk>
    Stefab Graf <graef@ebi.ac.uk>
    Nathan Johnson <njohnson@ebi.ac.uk>
    Ian Sealy
    Damian Keefe <dkeefe@ebi.ac.uk>
    Gautier Koscielny (koscieln@ebi.ac.uk)
    Daniel Rios <dani@ebi.ac.uk>
    Steve Trevanion <st3@sanger.ac.uk>
    James Smith <js5@sanger.ac.uk>
    James Gilbert <jgrg@sanger.ac.uk>
    Juguang Xiao <juguang@tll.org.sg> <juguang@fugu-sg.org>
    Graham McVicker
    Yuan Chen
    Eugene Kulesha <ek3@sanger.ac.uk>
    Chris Mungall <cjm@fruitfly.org>
    Anne Parker
    Damian Smedley
    Gudmundur Thorisson
    


Copyright:

    Copyright © 1999-2009 The European Bioinformatics Institute and
    Genome Research Limited, and others  <helpdesk@ensembl.org>

License: Ensembl License

    Redistribution and use in source and binary forms, with or without
    modification, are permitted provided that the following conditions
    are met:

       1. Redistributions of source code must retain the above copyright
          notice, this list of conditions and the following disclaimer.
       2. Redistributions in binary form must reproduce the above
          copyright notice, this list of conditions and the following
          disclaimer in the documentation and/or other materials provided
          with the distribution.
       3. The name "Ensembl" must not be used to endorse or
          promote products derived from this software without prior
          written permission. For written permission, please contact
          helpdesk@ensembl.org
       4. Products derived from this software may not be called "Ensembl"
          nor may "Ensembl" appear in their names without prior written
          permission of the Ensembl developers.
       5. Redistributions in any form whatsoever must retain the following
          acknowledgement:

          "This product includes software developed by Ensembl (http://www.ensembl.org/)." 
    THIS SOFTWARE IS PROVIDED BY THE ENSEMBL GROUP "AS IS" AND ANY
    EXPRESSED OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
    IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
    PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE ENSEMBL GROUP OR ITS
    CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
    EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
    PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA,
    OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
    THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
    (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
    OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.


License: Artistic
 This program is free software; you can redistribute it and/or modify
 it under the terms of the Artistic License, which comes with Perl.
 .
 On Debian GNU/Linux systems, the complete text of the Artistic License
 can be found in `/usr/share/common-licenses/Artistic'.

License: GPL-1+
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation; either version 1, or (at your option)
 any later version.
 .
 On Debian GNU/Linux systems, the complete text of version 1 of the
 General Public License can be found in `/usr/share/common-licenses/GPL-1'.



The Debian packaging is:

    Copyright (C) 2010 Richard Holland <holland@eaglegenomics.com>

and is licensed under the GPL version 3,
see "/usr/share/common-licenses/GPL-3".

